Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacetylase | SAMN03159363_6054 | Not Available | - | 6500872 - 6501618 | 26585.8 |
| transcriptional regulator, iclr family | SAMN03159363_6055 | Not Available | - | 6501615 - 6502478 | 30535.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN03159363_6056 | Not Available | + | 6502650 - 6503609 | 35192.7 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN03159363_6057 | Not Available | + | 6503836 - 6505473 | 60104.1 |
| protein of unknown function | SAMN03159363_6058 | Not Available | + | 6505479 - 6505679 | 7177.38 |
| homogentisate 1,2-dioxygenase | SAMN03159363_6059 | Not Available | + | 6505733 - 6507043 | 48279.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_6060 | Not Available | + | 6507040 - 6508020 | 33591.8 |
| fumarylacetoacetate hydrolase | SAMN03159363_6061 | Not Available | + | 6508043 - 6509308 | 45165.7 |
| penicillin-binding protein 2 | SAMN03159363_6062 | Not Available | - | 6509454 - 6511424 | 71442.3 |
| rod shape-determining protein mred | SAMN03159363_6063 | Not Available | - | 6511482 - 6512003 | 19097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.