Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pile | SAMN03159363_6023 | Not Available | + | 6471750 - 6472169 | 15275.4 |
| type iv fimbrial biogenesis protein fimt | SAMN03159363_6024 | Not Available | + | 6472166 - 6472744 | 19758.7 |
| transcriptional repressor nrdr | SAMN03159363_6025 | Not Available | - | 6472820 - 6473263 | 17155.8 |
| serine hydroxymethyltransferase | SAMN03159363_6026 | Not Available | - | 6473298 - 6474542 | 44856.0 |
| transglycosylase slt domain-containing protein | SAMN03159363_6028 | Not Available | - | 6474736 - 6475572 | 29533.6 |
| ompa family protein | SAMN03159363_6029 | Not Available | + | 6476231 - 6480004 | 132405.0 |
| protein of unknown function | SAMN03159363_6030 | Not Available | + | 6480196 - 6483066 | 100820.0 |
| hypothetical protein | SAMN03159363_6031 | Not Available | - | 6483149 - 6483745 | 21251.6 |
| hypothetical protein | SAMN03159363_6032 | Not Available | - | 6483840 - 6484631 | 29706.6 |
| udp-2,3-diacylglucosamine hydrolase | SAMN03159363_6033 | Not Available | - | 6484648 - 6485424 | 28702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.