Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate/methionine/tyrosine aminotransferase | SAMN03159363_6013 | Not Available | - | 6460181 - 6461368 | 43262.7 |
| nusb antitermination factor | SAMN03159363_6014 | Not Available | - | 6461365 - 6461901 | 19778.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN03159363_6015 | Not Available | - | 6461898 - 6462362 | 16185.4 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMN03159363_6016 | Not Available | - | 6462369 - 6463523 | 40804.1 |
| riboflavin synthase alpha chain | SAMN03159363_6017 | Not Available | - | 6463520 - 6464230 | 24775.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN03159363_6018 | Not Available | - | 6464307 - 6465434 | 39442.4 |
| type iv pilus assembly protein pilv | SAMN03159363_6019 | Not Available | + | 6465602 - 6466189 | 20593.7 |
| type iv pilus assembly protein pilw | SAMN03159363_6020 | Not Available | + | 6466176 - 6467150 | 34687.0 |
| type iv pilus assembly protein pilx | SAMN03159363_6021 | Not Available | + | 6467147 - 6467800 | 22656.6 |
| type iv pilus assembly protein pily1 | SAMN03159363_6022 | Not Available | + | 6467815 - 6471753 | 138685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.