Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase tcte | SAMN03159363_6003 | Not Available | - | 6448625 - 6450205 | 56985.9 |
| two-component system, ompr family, response regulator tctd | SAMN03159363_6004 | Not Available | - | 6450165 - 6450872 | 25627.7 |
| upf0176 protein | SAMN03159363_6005 | Not Available | - | 6450899 - 6451684 | 28896.5 |
| dna polymerase-3 subunit alpha | SAMN03159363_6006 | Not Available | + | 6451746 - 6455264 | 130333.0 |
| tigr00156 family protein | SAMN03159363_6007 | Not Available | + | 6455360 - 6455734 | 13398.1 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN03159363_6008 | Not Available | - | 6455778 - 6457508 | 62835.2 |
| colicin import membrane protein | SAMN03159363_6009 | Not Available | - | 6457615 - 6458532 | 32646.6 |
| biopolymer transport protein tolr | SAMN03159363_6010 | Not Available | - | 6458536 - 6458973 | 15546.1 |
| biopolymer transport protein tolq | SAMN03159363_6011 | Not Available | - | 6458990 - 6459712 | 26043.5 |
| acyl-coa thioester hydrolase | SAMN03159363_6012 | Not Available | - | 6459709 - 6460167 | 17271.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.