Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bile acid:na+ symporter, bass family | SAMN03159363_5983 | Not Available | - | 6430401 - 6431285 | 31089.3 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN03159363_5984 | Not Available | - | 6431381 - 6432148 | 28153.8 |
| hypothetical protein | SAMN03159363_5985 | Not Available | - | 6432170 - 6432760 | 22281.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN03159363_5986 | Not Available | + | 6432853 - 6433620 | 27299.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03159363_5987 | Not Available | + | 6433722 - 6434408 | 24087.7 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN03159363_5988 | Not Available | - | 6434435 - 6435949 | 52000.9 |
| acetyltransferase (gnat) family protein | SAMN03159363_5989 | Not Available | - | 6435953 - 6436492 | 19605.5 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_5990 | Not Available | + | 6436564 - 6437442 | 32536.1 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN03159363_5991 | Not Available | - | 6437461 - 6438642 | 40558.8 |
| trna (guanine-n7-)-methyltransferase | SAMN03159363_5992 | Not Available | - | 6438869 - 6439660 | 28966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.