Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase tcte | SAMN03159363_5973 | Not Available | - | 6417535 - 6418932 | 49862.8 |
| two-component system, ompr family, response regulator | SAMN03159363_5974 | Not Available | - | 6418929 - 6419597 | 24798.9 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN03159363_5975 | Not Available | + | 6419768 - 6420940 | 42043.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN03159363_5976 | Not Available | + | 6420937 - 6424110 | 113307.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN03159363_5977 | Not Available | + | 6424139 - 6425719 | 56355.9 |
| hypothetical protein | SAMN03159363_5978 | Not Available | + | 6425981 - 6426331 | 11826.7 |
| hypothetical protein | SAMN03159363_5979 | Not Available | - | 6426416 - 6426703 | 10485.4 |
| lysine methyltransferase | SAMN03159363_5980 | Not Available | - | 6426812 - 6427495 | 24670.9 |
| hypothetical protein | SAMN03159363_5981 | Not Available | + | 6427672 - 6428025 | 11943.1 |
| beta-glucosidase | SAMN03159363_5982 | Not Available | - | 6428069 - 6430339 | 81077.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.