Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN03159363_5891 | Not Available | - | 6335155 - 6335811 | 24929.8 |
| acetolactate synthase-1/2/3 large subunit | SAMN03159363_5892 | Not Available | + | 6335906 - 6337630 | 61606.4 |
| hypothetical protein | SAMN03159363_5893 | Not Available | - | 6337596 - 6337889 | 10311.3 |
| arac-type dna-binding protein | SAMN03159363_5894 | Not Available | + | 6338011 - 6338790 | 28128.9 |
| swib/mdm2 domain-containing protein | SAMN03159363_5895 | Not Available | - | 6338831 - 6339277 | 15216.0 |
| threonine/homoserine efflux transporter rhta | SAMN03159363_5896 | Not Available | - | 6339433 - 6340356 | 32396.8 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN03159363_5897 | Not Available | + | 6340398 - 6340778 | 13972.8 |
| isocitrate lyase | SAMN03159363_5898 | Not Available | + | 6341020 - 6342351 | 48605.2 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN03159363_5899 | Not Available | - | 6342450 - 6343409 | 34707.1 |
| quinol monooxygenase ygin | SAMN03159363_5900 | Not Available | + | 6343529 - 6343840 | 11069.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.