Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | SAMN03159363_5850 | Not Available | + | 6290911 - 6291633 | 26680.2 |
| arac-type dna-binding protein | SAMN03159363_5851 | Not Available | + | 6291933 - 6292739 | 29407.8 |
| phospholipase c accessory protein plcr | SAMN03159363_5852 | Not Available | + | 6292888 - 6293634 | 27226.3 |
| pectinacetylesterase | SAMN03159363_5853 | Not Available | + | 6293694 - 6295397 | 61433.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03159363_5854 | Not Available | - | 6295432 - 6296664 | 44085.7 |
| uncharacterized conserved protein | SAMN03159363_5855 | Not Available | - | 6296661 - 6297032 | 13238.6 |
| predicted homoserine dehydrogenase, contains c-terminal saf domain | SAMN03159363_5856 | Not Available | - | 6297223 - 6298584 | 48847.4 |
| dna-binding transcriptional regulator, gntr family | SAMN03159363_5858 | Not Available | - | 6299460 - 6300164 | 25228.3 |
| threonine dehydratase | SAMN03159363_5859 | Not Available | + | 6300281 - 6301246 | 34399.3 |
| putative abc transport system atp-binding protein | SAMN03159363_5860 | Not Available | - | 6301262 - 6301921 | 23386.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.