Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| betaine-aldehyde dehydrogenase | SAMN03159363_5799 | Not Available | + | 6224336 - 6225811 | 53055.7 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_5800 | Not Available | + | 6225856 - 6227109 | 44411.0 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_5801 | Not Available | + | 6227111 - 6227830 | 25870.5 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_5802 | Not Available | + | 6227976 - 6228695 | 25639.3 |
| branched-chain amino acid transport system permease protein | SAMN03159363_5803 | Not Available | + | 6228688 - 6229566 | 30434.0 |
| branched-chain amino acid transport system permease protein | SAMN03159363_5804 | Not Available | + | 6229575 - 6230606 | 36526.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_5805 | Not Available | + | 6230833 - 6231834 | 34130.6 |
| transcriptional regulator, iclr family | SAMN03159363_5806 | Not Available | - | 6231844 - 6232629 | 28165.2 |
| 3-oxoadipate coa-transferase, alpha subunit | SAMN03159363_5807 | Not Available | + | 6232807 - 6233508 | 24584.7 |
| 3-oxoadipate coa-transferase, beta subunit | SAMN03159363_5808 | Not Available | + | 6233511 - 6234152 | 22582.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.