Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpae | SAMN03159363_5789 | Not Available | - | 6213837 - 6215120 | 45808.8 |
| pilus assembly protein cpac | SAMN03159363_5790 | Not Available | - | 6215152 - 6216453 | 45435.6 |
| pilus assembly protein cpab | SAMN03159363_5791 | Not Available | - | 6216589 - 6217590 | 34608.9 |
| prepilin peptidase cpaa | SAMN03159363_5792 | Not Available | - | 6217668 - 6218177 | 18333.8 |
| pilus assembly protein flp/pila | SAMN03159363_5793 | Not Available | - | 6218195 - 6218380 | 6233.66 |
| l,d-transpeptidase catalytic domain | SAMN03159363_5794 | Not Available | - | 6218793 - 6220208 | 50973.1 |
| tetratricopeptide repeat-containing protein | SAMN03159363_5795 | Not Available | - | 6220286 - 6221380 | 38350.5 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_5796 | Not Available | + | 6221569 - 6222531 | 35493.9 |
| hypothetical protein | SAMN03159363_5797 | Not Available | + | 6222652 - 6223173 | 19252.8 |
| hypothetical protein | SAMN03159363_5798 | Not Available | + | 6223212 - 6224219 | 37771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.