Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN03159363_5779 | Not Available | + | 6203063 - 6204604 | 55466.7 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN03159363_5780 | Not Available | - | 6204749 - 6206170 | 51886.9 |
| putative tad-like flp pilus-assembly | SAMN03159363_5781 | Not Available | - | 6206187 - 6208205 | 68666.5 |
| flp pilus assembly protein tadg | SAMN03159363_5782 | Not Available | - | 6208217 - 6208693 | 16810.2 |
| flp pilus assembly protein tadg | SAMN03159363_5783 | Not Available | - | 6208690 - 6209172 | 17020.8 |
| protein of unknown function | SAMN03159363_5784 | Not Available | - | 6209216 - 6209632 | 14857.4 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN03159363_5785 | Not Available | - | 6209629 - 6210594 | 34003.6 |
| tight adherence protein c | SAMN03159363_5786 | Not Available | - | 6210591 - 6211550 | 35136.3 |
| tight adherence protein b | SAMN03159363_5787 | Not Available | - | 6211547 - 6212527 | 35432.1 |
| pilus assembly protein cpaf | SAMN03159363_5788 | Not Available | - | 6212520 - 6213833 | 48649.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.