Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN03159363_5759 | Not Available | - | 6174872 - 6176026 | 42249.8 |
| Trna-arg | Not Available | Not Available | + | 6176037 - 6176111 | Not Available |
| autotransporter secretion inner membrane protein tamb | SAMN03159363_5761 | Not Available | - | 6176147 - 6180232 | 142698.0 |
| autotransporter secretion outer membrane protein tama | SAMN03159363_5762 | Not Available | - | 6180248 - 6182113 | 68247.9 |
| hypothetical protein | SAMN03159363_5763 | Not Available | - | 6182268 - 6183455 | 46095.9 |
| protein n-acetyltransferase, rimj/riml family | SAMN03159363_5764 | Not Available | - | 6183479 - 6184066 | 21748.0 |
| hypothetical protein | SAMN03159363_5765 | Not Available | - | 6184104 - 6184349 | 8415.42 |
| moxr-like atpase | SAMN03159363_5766 | Not Available | - | 6184354 - 6185208 | 32423.3 |
| cytochrome c553 | SAMN03159363_5767 | Not Available | + | 6185361 - 6186053 | 24465.3 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN03159363_5768 | Not Available | - | 6186145 - 6187515 | 47812.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.