Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_5729 | Not Available | - | 6139018 - 6139503 | 17933.4 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN03159363_5730 | Not Available | - | 6139510 - 6140790 | 45228.7 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN03159363_5731 | Not Available | - | 6140790 - 6141752 | 34364.1 |
| rubredoxin | SAMN03159363_5732 | Not Available | + | 6141864 - 6142034 | 6256.46 |
| twitching motility two-component system response regulator pilg | SAMN03159363_5733 | Not Available | + | 6142119 - 6142517 | 14708.7 |
| twitching motility two-component system response regulator pilh | SAMN03159363_5734 | Not Available | + | 6142517 - 6142882 | 13542.5 |
| twitching motility protein pili | SAMN03159363_5735 | Not Available | + | 6142902 - 6143447 | 18987.4 |
| twitching motility protein pilj | SAMN03159363_5736 | Not Available | + | 6143490 - 6145817 | 81892.7 |
| chemosensory pili system protein chpa (sensor histidine kinase/response regulator) | SAMN03159363_5737 | Not Available | + | 6145846 - 6151968 | 218740.0 |
| deoxyribodipyrimidine photo-lyase | SAMN03159363_5738 | Not Available | - | 6152017 - 6153519 | 55987.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.