Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose transport system permease protein | SAMN03159363_5719 | Not Available | - | 6128520 - 6129503 | 33252.5 |
| ribose transport system atp-binding protein | SAMN03159363_5720 | Not Available | - | 6129500 - 6131119 | 58512.0 |
| ribose transport system substrate-binding protein | SAMN03159363_5721 | Not Available | - | 6131243 - 6132196 | 33116.4 |
| hypothetical protein | SAMN03159363_5722 | Not Available | + | 6132400 - 6133491 | 39381.2 |
| trypsin-like peptidase domain-containing protein | SAMN03159363_5723 | Not Available | - | 6133509 - 6134492 | 34257.2 |
| glutathione s-transferase | SAMN03159363_5724 | Not Available | + | 6134622 - 6135296 | 24817.1 |
| membrane protein yqaa, snare-associated domain | SAMN03159363_5725 | Not Available | - | 6135318 - 6135788 | 17146.4 |
| pp_05638 | SAMN03159363_5726 | Not Available | + | 6135963 - 6137027 | Not Available |
| fis family transcriptional regulator, factor for inversion stimulation protein | SAMN03159363_5727 | Not Available | + | 6137045 - 6137281 | 9088.16 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN03159363_5728 | Not Available | + | 6137298 - 6138905 | 56893.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.