Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, fadr family | SAMN03159363_0444 | Not Available | + | 463705 - 464589 | 31199.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_0445 | Not Available | + | 464704 - 465693 | 34780.2 |
| 5-dehydro-4-deoxyglucarate dehydratase | SAMN03159363_0446 | Not Available | + | 465842 - 466753 | 32406.1 |
| protein of unknown function | SAMN03159363_0447 | Not Available | + | 466797 - 467252 | 15542.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_0448 | Not Available | + | 467265 - 468251 | 34987.2 |
| glucarate dehydratase | SAMN03159363_0449 | Not Available | + | 468268 - 469629 | 49502.2 |
| aldehyde dehydrogenase (nad+) | SAMN03159363_0450 | Not Available | + | 469723 - 471159 | 50572.5 |
| osmoprotectant transport system permease protein | SAMN03159363_0451 | Not Available | - | 471167 - 472720 | 54832.5 |
| hypothetical protein | SAMN03159363_0452 | Not Available | + | 472832 - 473938 | 40953.4 |
| hypothetical protein | SAMN03159363_0453 | Not Available | - | 473981 - 475750 | 62459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.