Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0394 | Not Available | - | 413474 - 414523 | 39039.0 |
| methyltransferase domain-containing protein | SAMN03159363_0395 | Not Available | - | 414607 - 415563 | 35027.1 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN03159363_0396 | Not Available | - | 415634 - 416068 | 14949.3 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN03159363_0397 | Not Available | - | 416129 - 416734 | 22806.1 |
| dna repair photolyase | SAMN03159363_0398 | Not Available | + | 416856 - 417950 | 40996.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN03159363_0399 | Not Available | - | 417901 - 419397 | 52590.4 |
| rnd family efflux transporter, mfp subunit | SAMN03159363_0400 | Not Available | - | 419394 - 420650 | 44477.5 |
| heavy metal efflux pump, czca family | SAMN03159363_0401 | Not Available | - | 420655 - 423882 | 113987.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN03159363_0402 | Not Available | - | 424109 - 424663 | 20767.0 |
| 6-phosphogluconate dehydrogenase | SAMN03159363_0403 | Not Available | - | 424671 - 426092 | 51733.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.