Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0384 | Not Available | - | 405265 - 405891 | 23889.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN03159363_0385 | Not Available | - | 405899 - 406807 | 32658.5 |
| hypothetical protein | SAMN03159363_0386 | Not Available | - | 407013 - 407147 | 4684.58 |
| poly(3-hydroxybutyrate) depolymerase | SAMN03159363_0387 | Not Available | - | 407241 - 408458 | 45430.8 |
| glutathione s-transferase | SAMN03159363_0388 | Not Available | + | 408539 - 409195 | 24130.5 |
| transcriptional regulator, iclr family | SAMN03159363_0389 | Not Available | - | 409234 - 410055 | 29902.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN03159363_0390 | Not Available | + | 410165 - 411151 | 34171.9 |
| 5,5'-dehydrodivanillate o-demethylase | SAMN03159363_0391 | Not Available | + | 411165 - 412490 | 50689.9 |
| dopa 4,5-dioxygenase | SAMN03159363_0392 | Not Available | - | 412487 - 412834 | 13071.5 |
| protein of unknown function | SAMN03159363_0393 | Not Available | - | 412842 - 413477 | 24505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.