Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | SAMN03159363_0323 | Not Available | + | 340973 - 341641 | 23779.4 |
| Tmrna,resume consensus sequence (at 84): actaactgcaaacgacga | Not Available | Not Available | + | 341654 - 342040 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN03159363_0325 | Not Available | + | 342423 - 343340 | 33497.7 |
| sugar transporter | SAMN03159363_0326 | Not Available | + | 343633 - 345003 | 50133.9 |
| acyl-coa thioesterase | SAMN03159363_0327 | Not Available | + | 345278 - 345661 | 13938.8 |
| uncharacterized domain 1-containing protein | SAMN03159363_0328 | Not Available | + | 345686 - 346099 | 15014.8 |
| conserved tm helix | SAMN03159363_0329 | Not Available | + | 346347 - 347804 | 50743.9 |
| smi1 / knr4 family (sukh-1) | SAMN03159363_0330 | Not Available | + | 347990 - 348643 | 24362.7 |
| nonribosomal peptide synthetase dhbf | SAMN03159363_0331 | Not Available | + | 349591 - 357078 | 271609.0 |
| glycosyltransferase, mgt family | SAMN03159363_0332 | Not Available | + | 357087 - 358406 | 46641.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.