Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0303 | Not Available | + | 320033 - 320236 | 7356.01 |
| apolipoprotein n-acyltransferase | SAMN03159363_0304 | Not Available | - | 320223 - 321725 | 53937.6 |
| signal transduction histidine kinase | SAMN03159363_0305 | Not Available | - | 321752 - 323140 | 51111.1 |
| two-component system, ompr family, response regulator | SAMN03159363_0306 | Not Available | - | 323137 - 323802 | 24355.2 |
| membrane protein deda, snare-associated domain | SAMN03159363_0307 | Not Available | + | 324030 - 324662 | 22259.8 |
| phospholipid n-methyltransferase | SAMN03159363_0308 | Not Available | + | 324711 - 325337 | 22584.0 |
| aspartyl protease | SAMN03159363_0309 | Not Available | + | 325594 - 326337 | 25710.2 |
| competence protein comea | SAMN03159363_0310 | Not Available | - | 326500 - 326820 | 10951.3 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN03159363_0311 | Not Available | - | 326949 - 328118 | 43387.1 |
| uncharacterized integral membrane protein | SAMN03159363_0312 | Not Available | - | 328108 - 328443 | 11714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.