Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, fadr family | SAMN03159363_0273 | Not Available | - | 289797 - 290561 | 29290.2 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_0274 | Not Available | + | 290769 - 291974 | 43054.0 |
| branched-chain amino acid transport system permease protein | SAMN03159363_0275 | Not Available | + | 292101 - 292961 | 30426.6 |
| branched-chain amino acid transport system permease protein | SAMN03159363_0276 | Not Available | + | 292967 - 293932 | 34391.2 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_0277 | Not Available | + | 293929 - 294699 | 27551.6 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_0278 | Not Available | + | 294696 - 295412 | 25871.6 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN03159363_0279 | Not Available | + | 295453 - 296733 | 45388.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN03159363_0280 | Not Available | + | 296730 - 297848 | 39565.0 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN03159363_0281 | Not Available | + | 297845 - 299317 | 52061.6 |
| protein of unknown function | SAMN03159363_0282 | Not Available | + | 299387 - 299752 | 13331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.