Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03159363_0243 | Not Available | - | 257923 - 258855 | 32702.5 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN03159363_0244 | Not Available | - | 258966 - 260099 | 43053.8 |
| exodeoxyribonuclease vii small subunit | SAMN03159363_0245 | Not Available | + | 260387 - 260653 | 9311.0 |
| farnesyl diphosphate synthase | SAMN03159363_0246 | Not Available | + | 260650 - 261582 | 32032.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN03159363_0247 | Not Available | + | 261603 - 263453 | 66293.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN03159363_0248 | Not Available | - | 263592 - 264323 | 25798.4 |
| amino acid/amide abc transporter atp-binding protein 1, haat family (tc 3.a.1.4.-) | SAMN03159363_0249 | Not Available | - | 264320 - 265123 | 29370.4 |
| amino acid/amide abc transporter membrane protein 2, haat family (tc 3.a.1.4.-) | SAMN03159363_0250 | Not Available | - | 265120 - 265983 | 30087.8 |
| branched-chain amino acid transport system permease protein | SAMN03159363_0251 | Not Available | - | 265984 - 266865 | 30832.3 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_0252 | Not Available | - | 266994 - 268151 | 40454.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.