Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate racemase | SAMN03159363_0222 | Not Available | + | 236048 - 236800 | 26583.2 |
| zinc and cadmium transporter | SAMN03159363_0224 | Not Available | + | 237198 - 238103 | 32155.9 |
| hypothetical protein | SAMN03159363_0225 | Not Available | + | 238240 - 238455 | 7732.0 |
| n-acyl-d-amino-acid deacylase | SAMN03159363_0226 | Not Available | - | 238573 - 240039 | 52736.0 |
| peptide/nickel transport system atp-binding protein | SAMN03159363_0227 | Not Available | - | 240405 - 241394 | 36366.1 |
| peptide/nickel transport system atp-binding protein | SAMN03159363_0228 | Not Available | - | 241391 - 242428 | 37657.9 |
| peptide/nickel transport system permease protein | SAMN03159363_0229 | Not Available | - | 242436 - 243356 | 32637.8 |
| peptide/nickel transport system permease protein | SAMN03159363_0230 | Not Available | - | 243369 - 244304 | 33755.4 |
| peptide/nickel transport system substrate-binding protein | SAMN03159363_0231 | Not Available | - | 244377 - 245963 | 57175.8 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN03159363_0232 | Not Available | - | 246005 - 247456 | 51666.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.