Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | SAMN03159363_0212 | Not Available | - | 222590 - 223663 | 39113.8 |
| hypothetical protein | SAMN03159363_0213 | Not Available | - | 223725 - 224105 | 13285.6 |
| dna polymerase i | SAMN03159363_0214 | Not Available | + | 224203 - 227016 | 102770.0 |
| glutamate carboxypeptidase | SAMN03159363_0215 | Not Available | + | 227127 - 228419 | 46079.4 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_0216 | Not Available | + | 228451 - 229353 | 32508.6 |
| hypothetical protein | SAMN03159363_0217 | Not Available | + | 229425 - 229781 | 12092.0 |
| iron complex outermembrane recepter protein | SAMN03159363_0218 | Not Available | + | 229899 - 232067 | 78248.6 |
| pepsy-associated tm region | SAMN03159363_0219 | Not Available | + | 232083 - 233657 | 57596.7 |
| d-amino-acid dehydrogenase | SAMN03159363_0220 | Not Available | - | 233590 - 234816 | 42901.7 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN03159363_0221 | Not Available | + | 235046 - 235936 | 32106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.