Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vanillate o-demethylase ferredoxin subunit | SAMN03159363_0172 | Not Available | + | 182694 - 183686 | 35960.1 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN03159363_0173 | Not Available | + | 183709 - 185022 | 49765.9 |
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN03159363_0174 | Not Available | + | 185022 - 185522 | 19353.8 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN03159363_0175 | Not Available | + | 185530 - 187155 | 58327.4 |
| acetyl-coa acetyltransferase | SAMN03159363_0176 | Not Available | + | 187152 - 188324 | 41740.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03159363_0177 | Not Available | + | 188321 - 189574 | 45234.5 |
| kynurenine formamidase | SAMN03159363_0178 | Not Available | + | 189592 - 190404 | 29582.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03159363_0179 | Not Available | + | 190401 - 191135 | 25467.8 |
| branched-chain amino acid transport system substrate-binding protein | SAMN03159363_0180 | Not Available | + | 191186 - 192352 | 40945.5 |
| penicillin amidase | SAMN03159363_0181 | Not Available | + | 192369 - 194852 | 89742.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.