Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s16 | SAMN03159363_0152 | Not Available | + | 162750 - 163013 | 9674.75 |
| 16s rrna processing protein rimm | SAMN03159363_0153 | Not Available | + | 163029 - 163583 | 20123.9 |
| trna (guanine37-n1)-methyltransferase | SAMN03159363_0154 | Not Available | + | 163600 - 164346 | 27030.3 |
| large subunit ribosomal protein l19 | SAMN03159363_0155 | Not Available | + | 164458 - 164835 | 13953.9 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN03159363_0156 | Not Available | + | 164981 - 165700 | 26212.3 |
| adenosylcobinamide-phosphate synthase | SAMN03159363_0157 | Not Available | + | 165753 - 166754 | 36298.8 |
| histidinol-phosphate aminotransferase | SAMN03159363_0158 | Not Available | + | 166772 - 167866 | 39889.9 |
| family of unknown function | SAMN03159363_0159 | Not Available | + | 167879 - 168904 | 37822.8 |
| ribosome biogenesis gtpase | SAMN03159363_0160 | Not Available | - | 168915 - 169868 | 34559.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN03159363_0161 | Not Available | - | 169881 - 170234 | 12721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.