Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase apoenzyme | SAMN03159363_0122 | Not Available | - | 135430 - 136290 | 32780.4 |
| kynureninase | SAMN03159363_0123 | Not Available | - | 136287 - 137564 | 45891.8 |
| kynurenine formamidase | SAMN03159363_0124 | Not Available | - | 137575 - 138225 | 23653.3 |
| hypothetical protein | SAMN03159363_0125 | Not Available | - | 138301 - 138615 | 11143.2 |
| ornithine carbamoyltransferase | SAMN03159363_0126 | Not Available | - | 138641 - 139573 | 34816.5 |
| acetylornithine aminotransferase | SAMN03159363_0127 | Not Available | - | 139570 - 140778 | 42848.1 |
| protein of unknown function | SAMN03159363_0128 | Not Available | + | 140940 - 141287 | 12578.0 |
| ssu ribosomal protein s20p | SAMN03159363_0129 | Not Available | - | 141452 - 141766 | 11201.7 |
| putative peptidoglycan lipid ii flippase | SAMN03159363_0130 | Not Available | + | 141851 - 143437 | 55929.3 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN03159363_0131 | Not Available | + | 143500 - 144351 | 31798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.