Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yggt family protein | SAMN03159363_0072 | Not Available | + | 77312 - 77872 | 20545.5 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN03159363_0073 | Not Available | - | 77962 - 78834 | 31628.4 |
| tryptophan synthase, alpha chain | SAMN03159363_0074 | Not Available | - | 78931 - 79776 | 29691.1 |
| tryptophan synthase beta chain | SAMN03159363_0075 | Not Available | - | 79776 - 81062 | 46089.7 |
| phosphoribosylanthranilate isomerase | SAMN03159363_0076 | Not Available | - | 81111 - 81809 | 24377.1 |
| trna pseudouridine38-40 synthase | SAMN03159363_0077 | Not Available | - | 81806 - 82618 | 30015.7 |
| pilus assembly protein fimv | SAMN03159363_0078 | Not Available | - | 82644 - 85469 | 94718.3 |
| aspartate-semialdehyde dehydrogenase | SAMN03159363_0079 | Not Available | - | 85638 - 86783 | 40618.3 |
| 3-isopropylmalate dehydrogenase | SAMN03159363_0080 | Not Available | - | 86875 - 87963 | 39139.2 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN03159363_0081 | Not Available | - | 88001 - 88657 | 24545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.