Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkylated dna repair protein (dna oxidative demethylase) | SAMN03159363_0968 | Not Available | - | 1010900 - 1011547 | 23214.8 |
| ribosomal protein s18 acetylase rimi | SAMN03159363_0969 | Not Available | + | 1011615 - 1012073 | 16912.5 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN03159363_0970 | Not Available | - | 1012110 - 1013354 | 41482.7 |
| hypothetical protein | SAMN03159363_0971 | Not Available | - | 1013759 - 1014211 | 16109.6 |
| flxa-like protein | SAMN03159363_0972 | Not Available | + | 1014266 - 1014628 | 12514.0 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN03159363_0973 | Not Available | - | 1014647 - 1015522 | 31585.5 |
| dna-binding transcriptional regulator, merr family | SAMN03159363_0974 | Not Available | - | 1015670 - 1016716 | 36907.4 |
| lysr family transcriptional regulator, mexef-oprn operon transcriptional activator | SAMN03159363_0975 | Not Available | - | 1016811 - 1017746 | 34491.0 |
| nadph:quinone reductase | SAMN03159363_0976 | Not Available | + | 1017855 - 1018868 | 35427.5 |
| hypothetical protein | SAMN03159363_0977 | Not Available | + | 1019013 - 1019738 | 25470.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.