Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. EL159
Accession NumberFMUJ00000000.1
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccda | SAMN03159363_0938 | Not Available | - | 979880 - 981682 | 63207.5 |
| signal transduction histidine kinase | SAMN03159363_0939 | Not Available | - | 981794 - 983185 | 50729.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03159363_0940 | Not Available | + | 983478 - 984515 | 37516.8 |
| trans-aconitate 2-methyltransferase | SAMN03159363_0941 | Not Available | - | 984518 - 985309 | 28770.2 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_0942 | Not Available | + | 985401 - 986309 | 33017.3 |
| putative redox protein | SAMN03159363_0943 | Not Available | + | 986360 - 986770 | 14567.2 |
| two-component system, ompr family, response regulator | SAMN03159363_0944 | Not Available | + | 986943 - 987683 | 27795.8 |
| hypothetical protein | SAMN03159363_0945 | Not Available | + | 987707 - 987967 | 9566.7 |
| hypothetical protein | SAMN03159363_0946 | Not Available | - | 987979 - 988113 | 4954.16 |
| peroxiredoxin | SAMN03159363_0947 | Not Available | - | 988429 - 988995 | 20768.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.