Halodesulfovibrio spirochaetisodalis str. JC271

curved/spiralanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio spirochaetisodalis strain JC271 is a Gram-negative, anaerobic bacterium characterized by its curved or spiral shape, thriving optimally at a temperature of 32.0°C. This microbe's Gram-negative cell wall structure is indicative of its unique physiological characteristics, which may influence its interactions within anaerobic environments. The curved or spiral morphology of Halodesulfovibrio spirochaetisodalis suggests an adaptation to its ecological niche, likely contributing to its motility in viscous environments. The optimal growth temperature of 32.0°C indicates a preference for moderately warm habitats, which may align with specific ecological settings such as sediments or other anoxic environments where temperature remains stable. Given its anaerobic requirement, Halodesulfovibrio spirochaetisodalis may play a significant role in biogeochemical cycles, particularly in sulfur cycling, as many members of the genus Halodesulfovibrio are known to participate in sulfate reduction. This trait underscores the potential ecological importance of Halodesulfovibrio spirochaetisodalis in contributing to the maintenance of anaerobic ecosystems, where it may influence both microbial community dynamics and nutrient cycling. Further exploration of this strain could reveal insights into its metabolic pathways and interactions with other microorganisms within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio spirochaetisodalis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halodesulfovibrio spirochaetisodalis str. JC271

Accession NumberJXMS00000000.1

Gene Summary

Adenine Count

973910 bp

Thymine Count

971051 bp

Guanine Count

835595 bp

Cytosine Count

833914 bp

Genome Length

3614588 bp

Protein-coding Genes

2797 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative baseplate assembly protein vSP90_07990Not Available+1751900 - 175262824741.9
Putative baseplate assembly protein with lysozymeSP90_07995P51768+1752883 - 175322112301.7
Putative phage tail proteinSP90_08000P51767+1753218 - 175410532030.1
Tail proteinSP90_08010Not Available+1754878 - 175687572198.1
Contractile tail sheath proteinSP90_08025Q02TE1+1758603 - 175980543490.5
Tail proteinSP90_08030Not Available+1759805 - 176031418297.1
Hypothetical proteinSP90_08035Not Available+1760502 - 17607449199.99
hypothetical proteinSP90_08040Not Available+1760868 - 176273965406.9
Putative tail proteinSP90_08045Not Available+1762791 - 176317113676.2
Phage tail proteinSP90_08050Not Available+1763168 - 17633747246.86

Displaying genes 1 – 10 of 2944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

164 records
Metabolite IDMetabolite nameStructureCAS number
BASm00116991D-myo-inositol 2,3,4,5-tetrakisphosphateC6H8O18P4Chemical structure of 1D-myo-inositol 2,3,4,5-tetrakisphosphateNot available
Average492.011Da
Monoisotopic491.870500049Da
BASm00117001D-myo-inositol 2,4,5-triphosphateC6H9O15P3Chemical structure of 1D-myo-inositol 2,4,5-triphosphateNot available
Average414.048Da
Monoisotopic413.918722063Da
BASm00117011D-myo-inositol 2,5-bisphosphateC6H10O12P2Chemical structure of 1D-myo-inositol 2,5-bisphosphateNot available
Average336.084Da
Monoisotopic335.966944078Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 161–164 of 164 metabolites