Sulfurovum sp. PC08-66

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurovaceae

Genus

Sulfurovum

Description

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurovaceae
GenusSulfurovum
SpeciesSulfurovum sp. PC08-66
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sulfurovum sp. PC08-66

Accession NumberJQIQ00000000.1

Gene Summary

Adenine Count

621754 bp

Thymine Count

620351 bp

Guanine Count

427779 bp

Cytosine Count

441445 bp

Genome Length

2111759 bp

Protein-coding Genes

1936 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chemotaxis protein cheyKU28_00015O24973-1446 - 211425365.1
uracil-dna glycosylaseKU28_00020Q30Q92-2158 - 283525158.1
3-oxoacyl-acp synthaseKU28_00025A6QBY0-2838 - 383035501.6
phosphate acyltransferaseKU28_00030A6Q203-3843 - 481434412.9
50s ribosomal protein l32KU28_00035A8ERJ4-4838 - 49905843.05
nucleoside diphosphate kinaseKU28_00045Q7M7Z3-5354 - 576714963.0
ferredoxinKU28_00050Not Available-5877 - 623612965.0
s-adenosylmethionine synthetaseKU28_00055Q7M7Z2-6330 - 748441988.0
peroxidaseKU28_00060Not Available+7618 - 821421861.1
Ncrna_class:rnase_p_rnaNot AvailableNot Available+8237 - 8601Not Available

Displaying genes 1 – 10 of 1976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

115 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003276S-(5-deoxy-D-ribos-5-yl)-L-homocysteineC9H17NO6SChemical structure of S-(5-deoxy-D-ribos-5-yl)-L-homocysteine15912-98-8
Average267.299Da
Monoisotopic267.077658Da
BASm0003294GDP-alpha-D-rhamnoseC16H23N5O15P2Chemical structure of GDP-alpha-D-rhamnoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da

Displaying 31–40 of 115 metabolites