Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas sp. AAP120 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic / aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodopseudomonas sp. AAP120
Accession NumberLJIC00000000.1
Gene Summary
Adenine Count
1058929 bp
Thymine Count
1056988 bp
Guanine Count
2021049 bp
Cytosine Count
2024060 bp
Genome Length
6161026 bp
Protein-coding Genes
5357 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobs | IP86_01685 | P29933 | - | 359056 - 360051 | 36995.0 |
| hypothetical protein | IP86_01690 | Not Available | + | 360346 - 360972 | 22018.2 |
| molecular chaperone dnaj | IP86_01695 | P29944 | - | 361018 - 361662 | 24107.5 |
| bola family transcriptional regulator | IP86_01700 | P29943 | + | 361768 - 362037 | 9584.38 |
| dna-binding protein | IP86_01705 | P54505 | - | 362093 - 363460 | 50548.4 |
| 3-dehydroquinate synthase | IP86_01710 | Q6NCG9 | - | 363505 - 364650 | 40052.1 |
| shikimate kinase | IP86_01715 | Q6NCG8 | - | 364647 - 365261 | 22113.6 |
| histidine kinase | IP86_01720 | Not Available | + | 365426 - 365572 | 5372.82 |
| recombinase xerd | IP86_01725 | Q89XW5 | + | 365688 - 366653 | 35067.1 |
| cytochrome b | IP86_01730 | Not Available | - | 366650 - 367228 | 21413.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
