Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas sp. AAP120 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic / aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodopseudomonas sp. AAP120
Accession NumberLJIC00000000.1
Gene Summary
Adenine Count
1058929 bp
Thymine Count
1056988 bp
Guanine Count
2021049 bp
Cytosine Count
2024060 bp
Genome Length
6161026 bp
Protein-coding Genes
5357 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | IP86_00810 | Not Available | + | 163667 - 164161 | 18972.9 |
| peptidase | IP86_00815 | Q44364 | + | 164158 - 164718 | 20393.6 |
| hypothetical protein | IP86_00820 | Not Available | + | 164755 - 165084 | 12041.0 |
| hypothetical protein | IP86_00825 | Not Available | + | 165125 - 165364 | 9272.07 |
| lytic transglycosylase | IP86_00830 | Not Available | + | 165546 - 166304 | 27020.4 |
| type vi secretion protein | IP86_00835 | Not Available | + | 166543 - 168279 | 64312.2 |
| conjugal transfer protein trag | IP86_00850 | Not Available | + | 169918 - 171936 | 73715.7 |
| copg family transcriptional regulator | IP86_00855 | Not Available | + | 171940 - 172377 | 16276.4 |
| patatin | IP86_00860 | Not Available | + | 174990 - 176234 | 44756.9 |
| histidine kinase | IP86_00865 | Q9HZ47 | - | 176304 - 177539 | 44787.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
