Dehalococcoides sp. UCH007

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Dehalococcoidia

Order

Dehalococcoidales

Family

Dehalococcoidaceae

Genus

Dehalococcoides

Description

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassDehalococcoidia
OrderDehalococcoidales
FamilyDehalococcoidaceae
GenusDehalococcoides
SpeciesDehalococcoides sp. UCH007
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dehalococcoides sp. UCH007

Accession NumberNZ_AP014722.1

Gene Summary

Adenine Count

390600 bp

Thymine Count

391659 bp

Guanine Count

345116 bp

Cytosine Count

346173 bp

Genome Length

1473548 bp

Protein-coding Genes

1508 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna 2-thiouridine(34) synthase mnmaUCH007_RS03330Q3Z8D8+628902 - 62997538996.1
ribonuclease hiiUCH007_RS03335Q3Z8D7+629977 - 63061223017.4
yran family proteinUCH007_RS03340Q3Z8D6+630602 - 63096713768.7
thiamine phosphate synthaseUCH007_RS03345P72965+631003 - 63206138542.3
haloacid dehalogenaseUCH007_RS03350Not Available+632054 - 63270724265.9
sodium-translocating pyrophosphataseUCH007_RS03355Q8PYZ8+632712 - 63475169514.0
mbl fold metallo-hydrolaseUCH007_RS03360O67893-634764 - 63541723753.5
hypothetical proteinUCH007_RS03365Not Available+635488 - 63603319964.2
glycine--trna ligaseUCH007_RS03370Q6MNT9+636040 - 63737151060.7
exonuclease sbccd subunit dUCH007_RS03375Q9UZC9+637385 - 63863246430.2

Displaying genes 671 – 680 of 1560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

78 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001603(Z)-1,2-dichloroetheneC2H2Cl2Chemical structure of (Z)-1,2-dichloroetheneNot available
Average96.943Da
Monoisotopic95.953355478Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 78 metabolites