Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. YE44 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio sp. YE44
Accession NumberFMXT00000000.1
Gene Summary
Adenine Count
993277 bp
Thymine Count
984390 bp
Guanine Count
631192 bp
Cytosine Count
632993 bp
Genome Length
3242047 bp
Protein-coding Genes
2895 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ni,fe-hydrogenase iii small subunit | SAMN02910298_02490 | Not Available | + | 2716970 - 2717410 | 15444.7 |
| ech hydrogenase subunit d | SAMN02910298_02491 | Not Available | + | 2717460 - 2717834 | 14851.6 |
| ech hydrogenase subunit e | SAMN02910298_02492 | Not Available | + | 2717824 - 2718903 | 40457.1 |
| formate hydrogenlyase subunit 6/nadh:ubiquinone oxidoreductase subunit (chain i) | SAMN02910298_02493 | Not Available | + | 2719052 - 2719447 | 14684.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910298_02494 | Not Available | - | 2719608 - 2722703 | 118049.0 |
| hydrogenase maturation protein hypf | SAMN02910298_02495 | Not Available | + | 2722948 - 2725257 | 84874.5 |
| hypothetical protein | SAMN02910298_02496 | Not Available | + | 2725462 - 2727738 | 88104.0 |
| serine o-acetyltransferase | SAMN02910298_02497 | Not Available | + | 2727890 - 2728771 | 32633.1 |
| hypothetical protein | SAMN02910298_02498 | Not Available | + | 2729402 - 2729686 | 9420.96 |
| hydrogenase expression/formation protein hypc | SAMN02910298_02499 | Not Available | + | 2729933 - 2730142 | 7334.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.