Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. YE44 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudobutyrivibrio sp. YE44
Accession NumberFMXT00000000.1
Gene Summary
Adenine Count
993277 bp
Thymine Count
984390 bp
Guanine Count
631192 bp
Cytosine Count
632993 bp
Genome Length
3242047 bp
Protein-coding Genes
2895 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching enzyme, putative | SAMN02910298_01061 | Not Available | + | 1122329 - 1124437 | 79526.3 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02910298_01062 | Not Available | + | 1124461 - 1125645 | 41949.4 |
| hypothetical protein | SAMN02910298_01063 | Not Available | - | 1125713 - 1126549 | 32324.1 |
| l-ribulose-5-phosphate 4-epimerase | SAMN02910298_01064 | Not Available | - | 1126807 - 1127502 | 25843.4 |
| sugar (pentulose or hexulose) kinase | SAMN02910298_01065 | Not Available | - | 1127643 - 1129238 | 57723.1 |
| transaldolase | SAMN02910298_01066 | Not Available | - | 1129381 - 1130037 | 23231.2 |
| l-arabinose isomerase | SAMN02910298_01067 | Not Available | - | 1130306 - 1131802 | 56549.8 |
| hypothetical protein | SAMN02910298_01068 | Not Available | - | 1132005 - 1132709 | 26061.6 |
| gntr family transcriptional regulator, arabinose operon transcriptional repressor | SAMN02910298_01069 | Not Available | - | 1132804 - 1133871 | 39549.8 |
| protein of unknown function | SAMN02910298_01070 | Not Available | + | 1134035 - 1134679 | 23450.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.