Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Coprobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Barnesiellaceae |
| Genus | Coprobacter |
| Species | Coprobacter secundus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprobacter secundus str. 177
Accession NumberJTDA00000000.2
Gene Summary
Adenine Count
1276585 bp
Thymine Count
1298172 bp
Guanine Count
788538 bp
Cytosine Count
777477 bp
Genome Length
4140772 bp
Protein-coding Genes
3074 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-isopropylmalate synthase regulatory domain-containing protein | PU94_002760 | Not Available | + | 661821 - 663323 | 56415.6 |
| 3-isopropylmalate dehydrogenase | PU94_002765 | Not Available | + | 663358 - 664434 | 39610.7 |
| hypothetical protein | PU94_002770 | Not Available | + | 664554 - 664985 | 17399.3 |
| hypothetical protein | PU94_002775 | Not Available | + | 665241 - 666083 | 30566.3 |
| ompa family protein | PU94_002780 | Not Available | - | 666167 - 667357 | 43592.1 |
| glycoside hydrolase family 97 protein | PU94_002785 | Not Available | - | 667813 - 669765 | 74633.8 |
| murein hydrolase activator envc family protein | PU94_002790 | Not Available | + | 669964 - 670833 | 33391.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | PU94_002795 | Not Available | + | 670990 - 672147 | 43008.3 |
| rip metalloprotease rsep | PU94_002800 | Not Available | + | 672161 - 673483 | 49470.8 |
| class i sam-dependent rrna methyltransferase | PU94_002805 | Not Available | + | 673513 - 674697 | 44717.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.