Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine transport system substrate-binding protein | SAMN05444000_10162 | Not Available | + | 68297 - 69322 | 36913.5 |
| thiamine transport system permease protein | SAMN05444000_10163 | Not Available | + | 69337 - 70851 | 53588.4 |
| thiamine transport system atp-binding protein | SAMN05444000_10164 | Not Available | + | 70838 - 71530 | 24407.8 |
| gdp-l-fucose synthase | SAMN05444000_10165 | Not Available | - | 71535 - 72509 | 35952.9 |
| gdpmannose 4,6-dehydratase | SAMN05444000_10166 | Not Available | - | 72514 - 73632 | 41826.8 |
| hypothetical protein | SAMN05444000_10167 | Not Available | + | 73836 - 73973 | 5160.4 |
| Trna-val | Not Available | Not Available | + | 73961 - 74036 | Not Available |
| acyl dehydratase | SAMN05444000_10169 | Not Available | + | 74136 - 74600 | 17115.4 |
| nitronate monooxygenase | SAMN05444000_10170 | Not Available | + | 75558 - 76550 | 35062.8 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444000_10171 | Not Available | + | 76753 - 77619 | 30556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.