Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN05444000_10151 | Not Available | - | 57600 - 58301 | 26507.3 |
| dna-binding transcriptional regulator, marr family | SAMN05444000_10152 | Not Available | - | 58298 - 58795 | 18531.2 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05444000_10153 | Not Available | + | 58960 - 59829 | 32243.3 |
| citrate lyase subunit alpha / citrate coa-transferase | SAMN05444000_10154 | Not Available | + | 59835 - 61331 | 50931.1 |
| malonyl-coa/methylmalonyl-coa synthetase | SAMN05444000_10155 | Not Available | + | 61544 - 63046 | 54170.0 |
| hypothetical protein | SAMN05444000_10156 | Not Available | + | 63154 - 64311 | 42639.2 |
| hypothetical protein | SAMN05444000_10157 | Not Available | - | 64312 - 65253 | 33046.8 |
| uncharacterized protein | SAMN05444000_10158 | Not Available | - | 65250 - 65918 | 24868.8 |
| chorismate synthase | SAMN05444000_10159 | Not Available | - | 65918 - 67021 | 39414.9 |
| hypothetical protein | SAMN05444000_10160 | Not Available | - | 67140 - 67919 | 27279.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.