Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| butyryl-coa dehydrogenase | SAMN05444000_10141 | Not Available | + | 47167 - 48330 | 43238.6 |
| acyl-coa synthetase (ndp forming) | SAMN05444000_10142 | Not Available | + | 48451 - 50481 | 70428.0 |
| crotonobetainyl-coa hydratase | SAMN05444000_10143 | Not Available | + | 50485 - 51270 | 28620.3 |
| methyltransferase domain-containing protein | SAMN05444000_10144 | Not Available | - | 51277 - 51915 | 22860.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444000_10145 | Not Available | + | 51980 - 52849 | 31894.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444000_10146 | Not Available | - | 52903 - 54831 | 68223.9 |
| farnesyl-diphosphate synthase | SAMN05444000_10147 | Not Available | - | 54851 - 55720 | 30500.4 |
| exodeoxyribonuclease vii small subunit | SAMN05444000_10148 | Not Available | - | 55721 - 55963 | 8583.14 |
| acetoin utilization deacetylase acuc | SAMN05444000_10149 | Not Available | - | 55960 - 56895 | 33779.6 |
| hypothetical protein | SAMN05444000_10150 | Not Available | - | 57025 - 57411 | 14010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.