Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase (nadph) large subunit | SAMN05444000_10121 | Not Available | + | 24733 - 29271 | 164457.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05444000_10122 | Not Available | + | 29390 - 30112 | 26903.8 |
| glutathione s-transferase | SAMN05444000_10123 | Not Available | + | 30171 - 30836 | 25855.9 |
| epoxyqueuosine reductase | SAMN05444000_10124 | Not Available | + | 30860 - 31918 | 39431.9 |
| n-methylhydantoinase a/oxoprolinase/acetone carboxylase, beta subunit | SAMN05444000_10125 | Not Available | + | 31967 - 33973 | 70499.6 |
| peptide-methionine (s)-s-oxide reductase | SAMN05444000_10126 | Not Available | - | 33977 - 34474 | 18616.7 |
| peptide-methionine (r)-s-oxide reductase | SAMN05444000_10127 | Not Available | - | 34471 - 34920 | 16354.7 |
| thioredoxin | SAMN05444000_10128 | Not Available | - | 35100 - 35507 | 14964.9 |
| cytochrome c biogenesis protein ccda | SAMN05444000_10129 | Not Available | - | 35525 - 36238 | 24570.0 |
| threonine/homoserine efflux transporter rhta | SAMN05444000_10130 | Not Available | - | 36296 - 37171 | 30857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.