Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 2811 - 5642 | 18.01 |
| response regulator receiver domain-containing protein | SAMN05444000_1013 | Not Available | + | 3254 - 3619 | 13265.3 |
| ammonium transporter | SAMN05444000_1014 | Not Available | + | 3641 - 4867 | 42822.4 |
| pas domain s-box-containing protein | SAMN05444000_1015 | Not Available | + | 4882 - 8805 | 145275.0 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 5804 - 5918 | 18.01 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05444000_1016 | Not Available | + | 8802 - 9815 | 36915.6 |
| small-conductance mechanosensitive channel | SAMN05444000_1017 | Not Available | + | 9833 - 11791 | 73509.7 |
| hypothetical protein | SAMN05444000_1018 | Not Available | + | 11827 - 13515 | 63269.1 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444000_1019 | Not Available | + | 13518 - 14969 | 53787.2 |
| atpase family associated with various cellular activities (aaa) | SAMN05444000_10110 | Not Available | - | 15452 - 16507 | 39401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.