Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | SAMN05444000_101122 | Not Available | + | 125770 - 128220 | 89527.7 |
| chloramphenicol-sensitive protein rard | SAMN05444000_101123 | Not Available | + | 128340 - 129248 | 32256.5 |
| lysophospholipase l1 | SAMN05444000_101124 | Not Available | - | 129245 - 129940 | 25260.8 |
| hypothetical protein | SAMN05444000_101125 | Not Available | - | 129942 - 130358 | 15659.0 |
| ribosomal large subunit pseudouridine synthase a | SAMN05444000_101126 | Not Available | + | 130489 - 131115 | 23512.4 |
| glycosyl transferase family 11 | SAMN05444000_101127 | Not Available | - | 131214 - 132059 | 31674.2 |
| methyltransferase, fkbm family | SAMN05444000_101128 | Not Available | + | 132143 - 132823 | 25529.1 |
| aldehyde dehydrogenase (nad+) | SAMN05444000_101129 | Not Available | - | 132872 - 134299 | 50925.6 |
| glycosyltransferase involved in lps biosynthesis, gr25 family | SAMN05444000_101130 | Not Available | - | 134507 - 135220 | 26597.9 |
| polyribonucleotide nucleotidyltransferase | SAMN05444000_101131 | Not Available | - | 135302 - 137572 | 81647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.