Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05444000_10192 | Not Available | - | 98805 - 99692 | 32665.2 |
| hypothetical protein | SAMN05444000_10193 | Not Available | + | 99828 - 100175 | 12785.0 |
| fatty acid desaturase | SAMN05444000_10194 | Not Available | + | 100228 - 101115 | 34349.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN05444000_10195 | Not Available | + | 101155 - 101799 | 24069.1 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444000_10196 | Not Available | + | 101796 - 102785 | 35004.5 |
| exodeoxyribonuclease-3 | SAMN05444000_10197 | Not Available | + | 102914 - 103702 | 29580.9 |
| hypothetical protein | SAMN05444000_10198 | Not Available | + | 103702 - 104169 | 17352.6 |
| thioredoxin | SAMN05444000_10199 | Not Available | + | 104246 - 105160 | 31708.2 |
| hypothetical protein | SAMN05444000_101100 | Not Available | + | 105188 - 105832 | 24238.3 |
| hypothetical protein | SAMN05444000_101101 | Not Available | + | 105829 - 106014 | 6826.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.