Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| manganese/zinc/iron transport system substrate-binding protein | SAMN05444000_101153 | Not Available | + | 158513 - 159475 | 34564.6 |
| manganese/zinc/iron transport system atp-binding protein | SAMN05444000_101154 | Not Available | + | 159488 - 160294 | 28846.1 |
| manganese/zinc/iron transport system permease protein | SAMN05444000_101155 | Not Available | + | 160301 - 161506 | 42099.4 |
| manganese/zinc/iron transport system permease protein | SAMN05444000_101156 | Not Available | + | 161503 - 162429 | 32247.5 |
| sulfate permease, sulp family | SAMN05444000_101157 | Not Available | - | 162472 - 164223 | 62068.8 |
| sulfide:quinone oxidoreductase | SAMN05444000_101158 | Not Available | - | 164390 - 166063 | 60514.6 |
| protein of unknown function | SAMN05444000_101159 | Not Available | - | 166088 - 166300 | 7826.01 |
| dna mismatch repair protein mutl | SAMN05444000_101160 | Not Available | + | 166536 - 168395 | 66210.2 |
| dna recombination protein rmuc | SAMN05444000_101161 | Not Available | + | 168392 - 169543 | 42126.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444000_101162 | Not Available | - | 169548 - 170486 | 34372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.