Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase rsbw | SAMN05444000_101112 | Not Available | - | 117509 - 117943 | 15966.0 |
| anti-anti-sigma factor | SAMN05444000_101113 | Not Available | - | 117993 - 118226 | 8761.44 |
| hypothetical protein | SAMN05444000_101114 | Not Available | - | 118184 - 118327 | 4995.04 |
| acetyl-coa c-acetyltransferase | SAMN05444000_101115 | Not Available | + | 118518 - 119690 | 40265.2 |
| gaf domain-containing protein | SAMN05444000_101116 | Not Available | + | 119736 - 120203 | 16532.5 |
| transcriptional regulator, xre family with cupin sensor | SAMN05444000_101117 | Not Available | + | 120379 - 120939 | 20515.5 |
| uncharacterized conserved protein | SAMN05444000_101118 | Not Available | + | 121001 - 121321 | 11449.4 |
| dimethylglycine dehydrogenase | SAMN05444000_101119 | Not Available | + | 121334 - 123784 | 90480.1 |
| homocysteine s-methyltransferase | SAMN05444000_101120 | Not Available | + | 123781 - 124677 | 31554.8 |
| transcriptional regulator, arac family | SAMN05444000_101121 | Not Available | + | 124679 - 125665 | 36364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.