Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN05444000_101102 | Not Available | - | 106035 - 107285 | 45237.2 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444000_101103 | Not Available | + | 107339 - 108670 | 46461.7 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05444000_101104 | Not Available | + | 108793 - 109968 | 43012.4 |
| dna translocase ftsk | SAMN05444000_101105 | Not Available | + | 109985 - 112819 | 101677.0 |
| outer membrane lipoprotein-sorting protein | SAMN05444000_101106 | Not Available | + | 112905 - 113504 | 21957.5 |
| hypothetical protein | SAMN05444000_101107 | Not Available | - | 113521 - 114111 | 22616.1 |
| hypothetical protein | SAMN05444000_101108 | Not Available | - | 114191 - 115072 | 30898.1 |
| heat shock protein hspq | SAMN05444000_101109 | Not Available | + | 115156 - 115482 | 12651.6 |
| rhodanese-related sulfurtransferase | SAMN05444000_101110 | Not Available | - | 115479 - 115865 | 13989.8 |
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN05444000_101111 | Not Available | - | 115869 - 117446 | 55172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.