Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia gijangensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia gijangensis
Accession NumberFQZQ00000000.1
Gene Summary
Adenine Count
920331 bp
Thymine Count
925384 bp
Guanine Count
1137401 bp
Cytosine Count
1111454 bp
Genome Length
4094570 bp
Protein-coding Genes
3992 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444000_10172 | Not Available | + | 77715 - 77843 | 4739.64 |
| pyridoxal-phosphate dependent enzyme | SAMN05444000_10173 | Not Available | + | 78067 - 78471 | 14256.2 |
| dna gyrase subunit b | SAMN05444000_10174 | Not Available | - | 78959 - 81373 | 89489.7 |
| dna replication and repair protein recf | SAMN05444000_10175 | Not Available | - | 81474 - 82583 | 39768.5 |
| dna polymerase iii, beta subunit | SAMN05444000_10176 | Not Available | - | 82640 - 83758 | 40695.4 |
| chromosomal replication initiator protein dnaa | SAMN05444000_10177 | Not Available | - | 83958 - 85316 | 51467.9 |
| ssu ribosomal protein s20p | SAMN05444000_10178 | Not Available | - | 85820 - 86083 | 9634.71 |
| short chain enoyl-coa hydratase | SAMN05444000_10179 | Not Available | - | 86306 - 87082 | 27936.9 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN05444000_10180 | Not Available | - | 87147 - 87998 | 31388.5 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05444000_10181 | Not Available | + | 88150 - 88902 | 28050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.