Algoriphagus boseongensis str. CECT 8446

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus boseongensis
StrainCECT 8446

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus boseongensis str. CECT 8446

SNYF00000000.1

Gene Summary

Adenine Count

1221801 bp

Thymine Count

1237611 bp

Guanine Count

872643 bp

Cytosine Count

843789 bp

Genome Length

4176921 bp

Protein-coding Genes

3619 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ix secretion system porp/sprf family membrane proteinDFQ04_0002Not Available+1010 - 198436283.2
outer membrane protein ompa-like peptidoglycan-associated proteinDFQ04_0003Not Available+1975 - 433489307.2
transposase inso family proteinDFQ04_0005Not Available-4344 - 516831948.5
transposaseDFQ04_0006Not Available-5165 - 555415257.6
hypothetical proteinDFQ04_0012Not Available-7929 - 11537122742.0
tetratricopeptide repeat proteinDFQ04_0013Not Available+11787 - 1380576487.9
luxr family two component transcriptional regulatorDFQ04_0014Not Available+13848 - 1448023767.2
hypothetical proteinDFQ04_0015Not Available-14574 - 1498715935.1
hypothetical proteinDFQ04_0016Not Available-15096 - 1570722761.3
start domain-containing proteinDFQ04_0017Not Available+15926 - 1653723184.0

Displaying genes 1 – 10 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

32 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002232(2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateC8H5O7Chemical structure of (2E,4Z)-5-hydroxypenta-2,4-diene-1,2,5-tricarboxylateNot available
Average213.123Da
Monoisotopic213.005173241Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da

Displaying 1–10 of 32 metabolites