Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Acetobacterales
Family
Roseomonadaceae
Genus
Dankookia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Acetobacterales |
| Family | Roseomonadaceae |
| Genus | Dankookia |
| Species | Dankookia rubra |
| Strain | JCM30602 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1165470 bp
Thymine Count
1160521 bp
Guanine Count
2727637 bp
Cytosine Count
2728677 bp
Genome Length
7782305 bp
Protein-coding Genes
7102 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | E2C06_00005 | Not Available | + | 1 - 1135 | 38120.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 165 - 279 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 389 - 3115 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 808 - 962 | Not Available |
| pyridoxamine 5'-phosphate oxidase family protein | E2C06_00010 | Not Available | + | 1132 - 1749 | 21926.5 |
| amidase | E2C06_00015 | Not Available | - | 1879 - 3264 | 48431.5 |
| 16s ribosomal rna | Not Available | Not Available | + | 3450 - 4942 | Not Available |
| hypothetical protein | E2C06_00020 | Not Available | - | 3285 - 3512 | 8015.49 |
| hypothetical protein | E2C06_00025 | Not Available | + | 3658 - 3873 | 7769.6 |
| pas domain-containing protein | E2C06_00030 | Not Available | - | 4016 - 5647 | 59472.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.